EnhancerDB
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  3. rs201250767[chr1:168442386]
Enhancers that have rs201250767[chr1:168442386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs201250767[chr1:168442386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168442329 168443010 ZNF143 GTRD no Epithelial (MCF-7) 21348260
chr1 168442341 168442973 ZNF143 GTRD no Epithelial (MCF-7) 21348261
chr1 168442343 168443013 ZNF143 GTRD no Epithelial (MCF-7) 21348262
chr1 168442366 168443108 ZNF143 GTRD no Epithelial (MCF-7) 21348263
chr1 168442380 168442401 IRF1 JASPAR yes 32929015
chr1 168442384 168442399 PRDM1 JASPAR yes 32929016
chr1 168442384 168442399 STAT2 JASPAR yes 32929017
Genes associated with rs201250767[chr1:168442386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More