EnhancerDB
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  3. rs201353561[chr6:30804203]
Enhancers that have rs201353561[chr6:30804203]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201353561[chr6:30804203]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30804200 30804215 FOXP1 JASPAR yes 101057244
chr6 30804201 30804212 FOXA1 JASPAR yes 101057245
chr6 30804201 30804216 FOXA1 JASPAR yes 101057246
chr6 30804201 30804222 IRF1 JASPAR yes 101057247
chr6 30804202 30804214 FOXC2 JASPAR yes 101057248
chr6 30804203 30804215 FOXI1 JASPAR yes 101057249
Genes associated with rs201353561[chr6:30804203], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More