EnhancerDB
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  3. rs201420826[chr19:2615450]
Enhancers that have rs201420826[chr19:2615450]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs201420826[chr19:2615450]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2615440 2615461 IRF1 JASPAR yes 112083509
chr19 2615443 2615453 ETS1 JASPAR yes 112083510
chr19 2615443 2615453 FLI1 JASPAR yes 112083511
chr19 2615443 2615454 ETV2 JASPAR yes 112083512
chr19 2615443 2615455 ELF1 JASPAR yes 112083513
chr19 2615443 2615456 ELF1 JASPAR yes 112083514
chr19 2615444 2615453 ELK4 JASPAR yes 112083515
chr19 2615445 2615451 ETS1 JASPAR yes 112083516
chr19 2615445 2615455 ELK1 JASPAR yes 112083517
chr19 2615446 2615467 IRF1 JASPAR yes 112083518
chr19 2615447 2615468 IRF1 JASPAR yes 112083519
chr19 2615448 2615463 STAT2 JASPAR yes 112083520
chr19 2615449 2615470 IRF1 JASPAR yes 112083521
chr19 2615450 2615471 IRF1 JASPAR yes 112083522
Genes associated with rs201420826[chr19:2615450], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More