EnhancerDB
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  3. rs201541202[chr1:27755511]
Enhancers that have rs201541202[chr1:27755511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201541202[chr1:27755511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27755494 27755514 PPARG JASPAR yes 27692447
chr1 27755505 27755526 IRF1 JASPAR yes 27692448
chr1 27755507 27755528 IRF1 JASPAR yes 27692449
chr1 27755508 27755523 FOXP1 JASPAR yes 27692450
chr1 27755508 27755529 IRF1 JASPAR yes 27692451
chr1 27755509 27755530 IRF1 JASPAR yes 27692452
chr1 27755510 27755525 FOXP1 JASPAR yes 27692453
chr1 27755511 27755526 FOXP1 JASPAR yes 27692454
Genes associated with rs201541202[chr1:27755511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More