EnhancerDB
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  3. rs201542342[chr11:123058394]
Enhancers that have rs201542342[chr11:123058394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 123027364 123061967 enh14348
Brain (SK-N-MC) Astrocyte Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs201542342[chr11:123058394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 123058378 123058399 IRF1 JASPAR yes 42055762
chr11 123058380 123058395 FOXP1 JASPAR yes 42055764
chr11 123058380 123058401 IRF1 JASPAR yes 42055765
chr11 123058384 123058405 IRF1 JASPAR yes 42055766
chr11 123058386 123058401 PRDM1 JASPAR yes 42055767
chr11 123058386 123058401 STAT2 JASPAR yes 42055768
chr11 123058387 123058401 SPIC JASPAR yes 42055769
chr11 123058387 123058401 STAT1 JASPAR yes 42055770
chr11 123058389 123058404 FOXP1 JASPAR yes 42055771
Genes associated with rs201542342[chr11:123058394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More