EnhancerDB
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  3. rs201556772[chr17:42178156]
Enhancers that have rs201556772[chr17:42178156]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201556772[chr17:42178156]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42178148 42178159 NFIL3 JASPAR yes 54387186
chr17 42178150 42178171 IRF1 JASPAR yes 54387187
chr17 42178154 42178175 IRF1 JASPAR yes 54387188
chr17 42178155 42178170 FOXP1 JASPAR yes 54387189
chr17 42178156 42178171 FOXP1 JASPAR yes 54387190
Genes associated with rs201556772[chr17:42178156], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More