EnhancerDB
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  3. rs201630274[chr16:3909060]
Enhancers that have rs201630274[chr16:3909060]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 3901576 3926575 enh3861
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201630274[chr16:3909060]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 3908641 3909522 ZNF143 GTRD no Epithelial (MCF-7) 108175383
chr16 3908721 3909518 ZNF143 GTRD no Epithelial (MCF-7) 108175384
chr16 3908728 3909534 ZNF143 GTRD no Epithelial (MCF-7) 108175385
chr16 3908745 3909539 ZNF143 GTRD no Epithelial (MCF-7) 108175386
chr16 3908748 3909464 ZNF143 GTRD no Epithelial (MCF-7) 108175387
chr16 3909049 3909064 FOXP1 JASPAR yes 9235910
chr16 3909060 3909075 FOXP1 JASPAR yes 9235911
Genes associated with rs201630274[chr16:3909060], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More