EnhancerDB
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  3. rs201739340[chr17:869550]
Enhancers that have rs201739340[chr17:869550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs201739340[chr17:869550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 869539 869554 FOXA1 JASPAR yes 52646658
chr17 869543 869554 FOXA1 JASPAR yes 52646660
chr17 869544 869565 IRF1 JASPAR yes 52646661
Genes associated with rs201739340[chr17:869550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More