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- rs201770798[chr12:53955742]
Enhancers that have rs201770798[chr12:53955742]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
53952154 |
53966435 |
enh2368 |
|
|
Transcript factors that have rs201770798[chr12:53955742]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
53954615
|
53955949
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21549439
|
|
|
chr12
|
53954615
|
53955949
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108036194
|
|
|
chr12
|
53954676
|
53955824
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21549440
|
|
|
chr12
|
53954676
|
53955824
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108036195
|
|
|
chr12
|
53954900
|
53955903
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21549442
|
|
|
chr12
|
53954900
|
53955903
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108036197
|
|
|
chr12
|
53955263
|
53955919
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108036203
|
|
|
chr12
|
53955283
|
53955823
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108036204
|
|
|
chr12
|
53955285
|
53955881
|
TCF7L2
|
ENCODE Uniform TFBS
|
no
|
Pancreas (Panc1)
|
21549447
|
|
|
chr12
|
53955285
|
53955881
|
TCF7L2
|
ENCODE Uniform TFBS
|
no
|
Pancreas (Panc1)
|
108036205
|
|
|
chr12
|
53955289
|
53955865
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108036206
|
|
|
chr12
|
53955312
|
53955816
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108036207
|
|
|
chr12
|
53955316
|
53955856
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108036208
|
|
|
chr12
|
53955327
|
53955847
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108036209
|
|
|
chr12
|
53955328
|
53955812
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108036210
|
|
|
chr12
|
53955367
|
53955750
|
FOSL2
|
UCSC Txn Factor
|
no
|
Conserved
|
108036213
|
|
|
chr12
|
53955367
|
53955750
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108036214
|
|
|
chr12
|
53955406
|
53955762
|
TAF1
|
ENCODE Uniform TFBS
|
no
|
Brain (SK-N-SH)
|
108036219
|
|
|
chr12
|
53955445
|
53955815
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108036232
|
|
|
chr12
|
53955723
|
53955742
|
RFX2
|
JASPAR
|
yes
|
|
120991042
|
|
|
chr12
|
53955727
|
53955743
|
RFX3
|
JASPAR
|
yes
|
|
120991044
|
|
|
chr12
|
53955727
|
53955743
|
RFX4
|
JASPAR
|
yes
|
|
120991045
|
|
|
chr12
|
53955727
|
53955743
|
RFX5
|
JASPAR
|
yes
|
|
120991046
|
|
Genes associated with rs201770798[chr12:53955742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |