EnhancerDB
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  3. rs201790140[chr12:125186983]
Enhancers that have rs201790140[chr12:125186983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201790140[chr12:125186983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125184986 125187706 TCF7L2 GTRD no Colon (HCT116) 21581969
chr12 125184986 125187706 TCF7L2 GTRD no Colon (HCT116) 108069467
chr12 125185003 125187668 TCF7L2 GTRD no Colon (HCT116) 21581971
chr12 125185003 125187668 TCF7L2 GTRD no Colon (HCT116) 108069468
chr12 125185017 125187740 TCF7L2 GTRD no Colon (HCT116) 21581973
chr12 125185017 125187740 TCF7L2 GTRD no Colon (HCT116) 108069470
chr12 125185076 125187752 ZNF143 GTRD no Epithelial (MCF-7) 21581974
chr12 125185076 125187752 ZNF143 GTRD no Epithelial (MCF-7) 108069471
chr12 125185184 125187706 ZNF143 GTRD no Epithelial (MCF-7) 21581981
chr12 125185184 125187706 ZNF143 GTRD no Epithelial (MCF-7) 108069474
chr12 125185213 125187686 TCF7L2 GTRD no Colon (HCT116) 21581984
chr12 125185213 125187686 TCF7L2 GTRD no Colon (HCT116) 108069475
chr12 125185216 125187234 ZNF143 GTRD no Epithelial (MCF-7) 21581985
chr12 125185216 125187234 ZNF143 GTRD no Epithelial (MCF-7) 108069476
chr12 125185308 125187789 TCF7L2 GTRD no Colon (HCT116) 21581988
chr12 125185308 125187789 TCF7L2 GTRD no Colon (HCT116) 108069478
chr12 125185368 125187064 ZNF274 GTRD no Bone Marrow (K562) 21581992
chr12 125185368 125187064 ZNF274 GTRD no Bone Marrow (K562) 108069480
chr12 125185387 125187710 TCF7L2 GTRD no Colon (HCT116) 21581993
chr12 125185387 125187710 TCF7L2 GTRD no Colon (HCT116) 108069481
chr12 125185485 125187059 ZNF143 GTRD no Epithelial (MCF-7) 21581995
chr12 125185485 125187059 ZNF143 GTRD no Epithelial (MCF-7) 108069483
chr12 125185530 125187641 TCF7L2 GTRD no Colon (HCT116) 21581996
chr12 125185530 125187641 TCF7L2 GTRD no Colon (HCT116) 108069484
chr12 125185662 125187175 TCF7L2 GTRD no Colon (HCT116) 21582002
chr12 125185662 125187175 TCF7L2 GTRD no Colon (HCT116) 108069490
chr12 125185721 125187327 ZNF274 GTRD no Bone Marrow (K562) 21582004
chr12 125185721 125187327 ZNF274 GTRD no Bone Marrow (K562) 108069492
chr12 125185722 125187680 TCF7L2 GTRD no Colon (HCT116) 21582005
chr12 125185722 125187680 TCF7L2 GTRD no Colon (HCT116) 108069493
chr12 125185739 125187185 ZNF274 GTRD no Bone Marrow (K562) 21582012
chr12 125185739 125187185 ZNF274 GTRD no Bone Marrow (K562) 108069500
chr12 125185858 125187043 TCF7L2 GTRD no Colon (HCT116) 21582025
chr12 125185858 125187043 TCF7L2 GTRD no Colon (HCT116) 108069513
chr12 125186111 125187316 TCF7L2 GTRD no Colon (HCT116) 21582067
chr12 125186312 125187007 ZNF274 GTRD no Bone Marrow (K562) 21582075
Genes associated with rs201790140[chr12:125186983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More