EnhancerDB
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  3. rs201834340[chr6:11222927]
Enhancers that have rs201834340[chr6:11222927]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201834340[chr6:11222927]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11222921 11222937 RFX2 JASPAR yes 99866280
chr6 11222921 11222937 RFX3 JASPAR yes 99866281
chr6 11222921 11222937 RFX4 JASPAR yes 99866282
chr6 11222921 11222937 RFX5 JASPAR yes 99866283
Genes associated with rs201834340[chr6:11222927], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More