EnhancerDB
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  3. rs201840144[chr1:39866154]
Enhancers that have rs201840144[chr1:39866154]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39853990 39867590 enh11763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs201840144[chr1:39866154]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39866142 39866154 HLF JASPAR yes 28273803
chr1 39866143 39866154 CEBPB JASPAR yes 28273807
chr1 39866150 39866171 IRF1 JASPAR yes 28273808
chr1 39866153 39866168 FOXP1 JASPAR yes 28273809
chr1 39866154 39866169 FOXP1 JASPAR yes 28273810
Genes associated with rs201840144[chr1:39866154], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More