EnhancerDB
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  3. rs201870060[chr3:185460959]
Enhancers that have rs201870060[chr3:185460959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185460642 185522464 enh21175
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201870060[chr3:185460959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185460945 185460960 HNF1A JASPAR yes 8282764
chr3 185460948 185460964 SOX4 JASPAR yes 8282765
chr3 185460949 185460959 MEOX2 JASPAR yes 8282766
chr3 185460949 185460964 SOX21 JASPAR yes 8282767
chr3 185460950 185460961 FOXB1 JASPAR yes 8282768
chr3 185460951 185460962 PHOX2A JASPAR yes 8282769
chr3 185460951 185460962 PROP1 JASPAR yes 8282770
chr3 185460954 185460975 IRF1 JASPAR yes 8282771
chr3 185460957 185460961 YY1 TRANSFAC yes 8282772
Genes associated with rs201870060[chr3:185460959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More