EnhancerDB
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  3. rs201877000[chr1:8173653]
Enhancers that have rs201877000[chr1:8173653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8164245 8205415 enh11462
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs201877000[chr1:8173653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8172910 8173831 TCF7L2 GTRD no Colon (HCT116) 107801952
chr1 8173641 8173662 IRF1 JASPAR yes 26514450
chr1 8173647 8173668 IRF1 JASPAR yes 26514451
chr1 8173648 8173654 TCF4 TRANSFAC yes 26514452
chr1 8173648 8173663 FOXP1 JASPAR yes 26514453
chr1 8173649 8173660 FOXP2 JASPAR yes 26514454
chr1 8173649 8173661 FOXC2 JASPAR yes 26514455
Genes associated with rs201877000[chr1:8173653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More