EnhancerDB
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  3. rs201880548[chr16:24995819]
Enhancers that have rs201880548[chr16:24995819]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs201880548[chr16:24995819]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 24995806 24995821 MEF2C JASPAR yes 10092014
chr16 24995807 24995822 MEF2A JASPAR yes 10092015
chr16 24995808 24995820 MEF2A JASPAR yes 10092016
chr16 24995808 24995820 MEF2B JASPAR yes 10092017
chr16 24995808 24995820 MEF2D JASPAR yes 10092018
chr16 24995814 24995829 MEF2C JASPAR yes 10092019
Genes associated with rs201880548[chr16:24995819], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More