EnhancerDB
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  3. rs201898425[chr15:42221838]
Enhancers that have rs201898425[chr15:42221838]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201898425[chr15:42221838]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42221329 42221925 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651297
chr15 42221329 42221925 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135229
chr15 42221373 42221893 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651300
chr15 42221373 42221893 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135232
chr15 42221436 42222026 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651306
chr15 42221436 42222026 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135239
chr15 42221450 42221886 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651310
chr15 42221450 42221886 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135243
chr15 42221468 42221878 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651315
chr15 42221468 42221878 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135249
chr15 42221469 42221849 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651316
chr15 42221469 42221849 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135250
chr15 42221544 42221936 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651322
chr15 42221544 42221936 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135257
chr15 42221575 42221955 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651326
chr15 42221575 42221955 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135261
chr15 42221577 42221853 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21651327
chr15 42221577 42221853 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108135262
chr15 42221837 42221843 TBP TRANSFAC yes 23006454
Genes associated with rs201898425[chr15:42221838], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More