EnhancerDB
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  3. rs201954825[chr5:79541431]
Enhancers that have rs201954825[chr5:79541431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79539202 79550375 enh8515
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs201954825[chr5:79541431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79541418 79541433 FOXA1 JASPAR yes 63712142
chr5 79541419 79541431 FOXI1 JASPAR yes 63712143
chr5 79541420 79541432 FOXC2 JASPAR yes 63712144
chr5 79541420 79541434 ONECUT2 JASPAR yes 63712145
chr5 79541420 79541434 ONECUT3 JASPAR yes 63712146
chr5 79541421 79541432 FOXB1 JASPAR yes 63712147
chr5 79541421 79541432 FOXC1 JASPAR yes 63712148
chr5 79541424 79541436 FOXC2 JASPAR yes 63712150
chr5 79541427 79541442 FOXP1 JASPAR yes 63712152
chr5 79541427 79541448 IRF1 JASPAR yes 63712153
chr5 79541429 79541444 FOXP1 JASPAR yes 63712154
Genes associated with rs201954825[chr5:79541431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More