EnhancerDB
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  3. rs202012837[chr1:43496223]
Enhancers that have rs202012837[chr1:43496223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43495245 43526835 enh11806
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Ovary Muscle (A673) Placenta Uterus Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs202012837[chr1:43496223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43496202 43496223 IRF1 JASPAR yes 28479896
chr1 43496203 43496224 IRF1 JASPAR yes 28479897
chr1 43496207 43496228 IRF1 JASPAR yes 28479898
chr1 43496208 43496223 FOXP1 JASPAR yes 28479899
chr1 43496208 43496229 IRF1 JASPAR yes 28479900
chr1 43496209 43496230 IRF1 JASPAR yes 28479901
chr1 43496210 43496225 FOXP1 JASPAR yes 28479902
chr1 43496210 43496231 IRF1 JASPAR yes 28479903
chr1 43496211 43496232 IRF1 JASPAR yes 28479904
chr1 43496212 43496227 FOXP1 JASPAR yes 28479905
chr1 43496213 43496228 FOXP1 JASPAR yes 28479906
chr1 43496214 43496229 FOXP1 JASPAR yes 28479907
chr1 43496215 43496230 FOXP1 JASPAR yes 28479908
chr1 43496215 43496236 IRF1 JASPAR yes 28479909
chr1 43496216 43496231 FOXP1 JASPAR yes 28479910
chr1 43496217 43496232 FOXP1 JASPAR yes 28479911
chr1 43496217 43496238 IRF1 JASPAR yes 28479912
chr1 43496219 43496240 IRF1 JASPAR yes 28479913
chr1 43496221 43496242 IRF1 JASPAR yes 28479914
chr1 43496223 43496238 PRDM1 JASPAR yes 28479915
chr1 43496223 43496238 STAT2 JASPAR yes 28479916
Genes associated with rs202012837[chr1:43496223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More