EnhancerDB
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  3. rs202146238[chr1:171412268]
Enhancers that have rs202146238[chr1:171412268]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs202146238[chr1:171412268]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171412259 171412280 IRF1 JASPAR yes 33081814
chr1 171412262 171412276 SPI1 JASPAR yes 33081815
chr1 171412265 171412280 FOXP1 JASPAR yes 33081816
chr1 171412267 171412282 FOXP1 JASPAR yes 33081817
chr1 171412268 171412283 FOXP1 JASPAR yes 33081818
Genes associated with rs202146238[chr1:171412268], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More