EnhancerDB
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  3. rs202205120[chr2:102332985]
Enhancers that have rs202205120[chr2:102332985]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 102332970 102333042 vista32514
VISTA
Transcript factors that have rs202205120[chr2:102332985]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102332970 102332985 FOXP1 JASPAR yes 22102098
chr2 102332970 102332985 FOXP1 JASPAR yes 75830097
chr2 102332970 102332991 IRF1 JASPAR yes 22102099
chr2 102332970 102332991 IRF1 JASPAR yes 75830098
chr2 102332971 102332986 FOXP1 JASPAR yes 22102100
chr2 102332971 102332986 FOXP1 JASPAR yes 75830099
chr2 102332973 102332988 FOXP1 JASPAR yes 22102101
chr2 102332973 102332988 FOXP1 JASPAR yes 75830100
chr2 102332980 102332998 NR3C1 JASPAR yes 22102102
chr2 102332980 102332998 NR3C1 JASPAR yes 75830101
Genes associated with rs202205120[chr2:102332985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More