EnhancerDB
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  3. rs202229601[chr12:109109014]
Enhancers that have rs202229601[chr12:109109014]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109103554 109121615 enh14974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs202229601[chr12:109109014]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109109008 109109023 FOXP1 JASPAR yes 123615395
chr12 109109008 109109029 IRF1 JASPAR yes 123615396
chr12 109109010 109109016 TBP TRANSFAC yes 123615397
chr12 109109010 109109021 FOXC1 JASPAR yes 123615398
chr12 109109010 109109022 FOXC2 JASPAR yes 123615399
chr12 109109011 109109022 FOXP2 JASPAR yes 123615400
chr12 109109012 109109027 STAT2 JASPAR yes 123615401
chr12 109109013 109109025 IRF1 JASPAR yes 123615402
chr12 109109013 109109028 FOXP1 JASPAR yes 123615403
chr12 109109013 109109034 IRF1 JASPAR yes 123615404
Genes associated with rs202229601[chr12:109109014], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More