EnhancerDB
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  3. rs202239438[chr1:113451660]
Enhancers that have rs202239438[chr1:113451660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113444365 113452393 enh12155
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs202239438[chr1:113451660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113451625 113452079 ZNF143 GTRD no Epithelial (MCF-7) 21329761
chr1 113451643 113451664 IRF1 JASPAR yes 31601060
chr1 113451644 113451665 IRF1 JASPAR yes 31601061
chr1 113451645 113451665 RREB1 JASPAR yes 31601062
chr1 113451646 113451660 IRF7 JASPAR yes 31601063
chr1 113451648 113451660 IRF1 JASPAR yes 31601064
chr1 113451648 113451663 STAT2 JASPAR yes 31601065
chr1 113451649 113451664 FOXP1 JASPAR yes 31601066
chr1 113451649 113451670 IRF1 JASPAR yes 31601067
chr1 113451650 113451671 IRF1 JASPAR yes 31601068
chr1 113451651 113451671 RREB1 JASPAR yes 31601069
chr1 113451652 113451666 IRF7 JASPAR yes 31601070
chr1 113451656 113451671 FOXP1 JASPAR yes 31601071
chr1 113451656 113451676 RREB1 JASPAR yes 31601072
chr1 113451656 113451677 IRF1 JASPAR yes 31601073
chr1 113451657 113451678 IRF1 JASPAR yes 31601074
chr1 113451658 113451678 RREB1 JASPAR yes 31601075
Genes associated with rs202239438[chr1:113451660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More