EnhancerDB
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  3. rs202246679[chr1:8729241]
Enhancers that have rs202246679[chr1:8729241]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8718005 8741275 enh11473
Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs202246679[chr1:8729241]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8729235 8729251 GLIS1 JASPAR yes 26584310
chr1 8729236 8729250 GLIS2 JASPAR yes 26584311
chr1 8729236 8729250 GLIS3 JASPAR yes 26584312
chr1 8729237 8729247 SP1 JASPAR yes 26584313
chr1 8729237 8729247 ZNF740 JASPAR yes 26584314
chr1 8729238 8729248 ZNF740 JASPAR yes 26584315
chr1 8729239 8729249 ZNF740 JASPAR yes 26584316
Genes associated with rs202246679[chr1:8729241], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More