EnhancerDB
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  3. rs2053294[chr15:67399084]
Enhancers that have rs2053294[chr15:67399084]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67361222 67430135 enh3672
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2053294[chr15:67399084]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67398072 67400618 ZNF274 GTRD no Bone Marrow (K562) 21662595
chr15 67398072 67400618 ZNF274 GTRD no Bone Marrow (K562) 108149437
chr15 67398153 67400534 ZNF274 GTRD no Bone Marrow (K562) 21662596
chr15 67398153 67400534 ZNF274 GTRD no Bone Marrow (K562) 108149438
chr15 67398308 67399767 ZNF274 GTRD no Bone Marrow (K562) 21662597
chr15 67398308 67399767 ZNF274 GTRD no Bone Marrow (K562) 108149439
chr15 67398311 67399377 ZNF274 GTRD no Bone Marrow (K562) 21662598
chr15 67398311 67399377 ZNF274 GTRD no Bone Marrow (K562) 108149440
chr15 67398400 67399306 ZNF274 GTRD no Bone Marrow (K562) 21662599
chr15 67398400 67399306 ZNF274 GTRD no Bone Marrow (K562) 108149441
chr15 67398699 67399295 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21662600
chr15 67398699 67399295 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108149442
chr15 67399024 67399620 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21662601
chr15 67399024 67399620 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108149443
chr15 67399081 67399093 GLI2 JASPAR yes 24208283
Genes associated with rs2053294[chr15:67399084], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More