EnhancerDB
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  3. rs2073519[chr6:16323392]
Enhancers that have rs2073519[chr6:16323392]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16314945 16326043 enh8974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2073519[chr6:16323392]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16323375 16323396 IRF1 JASPAR yes 100287398
chr6 16323385 16323400 HNF1A JASPAR yes 100287400
chr6 16323386 16323398 HNF1B JASPAR yes 100287401
chr6 16323386 16323399 HNF1B JASPAR yes 100287402
chr6 16323386 16323400 POU4F1 JASPAR yes 100287403
chr6 16323386 16323402 POU4F3 JASPAR yes 100287404
chr6 16323387 16323399 HNF1B JASPAR yes 100287405
chr6 16323390 16323406 POU4F2 JASPAR yes 100287406
chr6 16323390 16323406 POU4F3 JASPAR yes 100287407
chr6 16323392 16323396 YY1 TRANSFAC yes 100287408
chr6 16323392 16323406 POU4F1 JASPAR yes 100287409
Genes associated with rs2073519[chr6:16323392], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More