EnhancerDB
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  3. rs2096560[chr11:65215509]
Enhancers that have rs2096560[chr11:65215509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65180298 65217415 enh1825
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2096560[chr11:65215509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65215124 65215588 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21493013
chr11 65215178 65215534 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21493014
chr11 65215267 65216290 ZNF274 GTRD no Blood (GM12878) 21493015
chr11 65215274 65217257 ZNF274 GTRD no Bone Marrow (K562) 21493016
chr11 65215277 65217003 ZNF274 GTRD no Blood (GM12878) 21493017
chr11 65215288 65216175 ZNF274 GTRD no Bone Marrow (K562) 21493018
chr11 65215290 65216476 ZNF274 GTRD no Blood (GM12878) 21493019
chr11 65215300 65216325 ZNF274 GTRD no Bone Marrow (K562) 21493020
chr11 65215325 65216100 ZNF274 GTRD no Blood (GM12878) 21493021
chr11 65215356 65216298 ZNF274 GTRD no Blood (GM12878) 21493022
chr11 65215369 65216090 ZNF274 GTRD no Bone Marrow (K562) 21493023
chr11 65215380 65216249 ZNF274 GTRD no Bone Marrow (K562) 21493024
chr11 65215409 65216342 ZNF274 GTRD no Bone Marrow (K562) 21493025
chr11 65215415 65216750 ZNF274 GTRD no Blood (GM12878) 21493026
chr11 65215424 65216309 ZNF274 GTRD no Bone Marrow (K562) 21493027
chr11 65215429 65215657 ZNF274 GTRD no Bone Marrow (K562) 21493028
chr11 65215434 65217367 ZNF274 GTRD no Bone Marrow (K562) 21493029
chr11 65215441 65215909 ZNF274 GTRD no Bone Marrow (K562) 21493030
chr11 65215465 65216250 ZNF274 GTRD no Blood (GM12878) 21493031
chr11 65215486 65216432 ZNF274 GTRD no Blood (GM12878) 21493032
chr11 65215487 65216452 ZNF274 GTRD no Bone Marrow (K562) 21493033
chr11 65215507 65215516 THAP1 JASPAR yes 39318155
chr11 65215507 65216017 TCF7L2 GTRD no Colon (HCT116) 21493034
Genes associated with rs2096560[chr11:65215509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More