EnhancerDB
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  3. rs2114477[chr15:42227441]
Enhancers that have rs2114477[chr15:42227441]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2114477[chr15:42227441]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42227087 42227457 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651346
chr15 42227087 42227457 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135305
chr15 42227177 42227613 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651350
chr15 42227177 42227613 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135310
chr15 42227433 42227453 TP53 JASPAR yes 23007275
Genes associated with rs2114477[chr15:42227441], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More