EnhancerDB
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  3. rs2114978[chr5:77815254]
Enhancers that have rs2114978[chr5:77815254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 77815161 77815372 vista48143
VISTA
Transcript factors that have rs2114978[chr5:77815254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77815244 77815254 SP1 JASPAR yes 63595749
chr5 77815244 77815254 SP1 JASPAR yes 70668470
chr5 77815254 77815258 NFE TRANSFAC yes 63595752
chr5 77815254 77815258 NFE TRANSFAC yes 70668473
Genes associated with rs2114978[chr5:77815254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More