EnhancerDB
  1. Home
  2. SNP
  3. rs2144298[chr1:230280198]
Enhancers that have rs2144298[chr1:230280198]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2144298[chr1:230280198]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230279624 230280767 ZNF143 GTRD no Epithelial (MCF-7) 21391538
chr1 230279624 230280767 ZNF143 GTRD no Epithelial (MCF-7) 107686553
chr1 230279624 230280767 ZNF143 GTRD no Epithelial (MCF-7) 107878768
chr1 230280188 230280199 GCM1 JASPAR yes 36026172
Genes associated with rs2144298[chr1:230280198], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More