EnhancerDB
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  3. rs2187519[chr11:122585086]
Enhancers that have rs2187519[chr11:122585086]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr11 122584764 122585535 vista11878
VISTA
Transcript factors that have rs2187519[chr11:122585086]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122584480 122585290 ZBTB33 GTRD no Brain (SK-N-SH) 21519672
chr11 122584480 122585290 ZBTB33 GTRD no Brain (SK-N-SH) 108004388
chr11 122584552 122585137 ZBTB33 GTRD no Brain (SK-N-SH) 21519674
chr11 122584552 122585137 ZBTB33 GTRD no Brain (SK-N-SH) 108004390
chr11 122584578 122585267 ZBTB33 GTRD no Brain (SK-N-SH) 21519675
chr11 122584578 122585267 ZBTB33 GTRD no Brain (SK-N-SH) 108004391
chr11 122584580 122585194 ZBTB33 GTRD no Brain (SK-N-SH) 21519676
chr11 122584580 122585194 ZBTB33 GTRD no Brain (SK-N-SH) 108004392
chr11 122584593 122585137 ZBTB33 GTRD no Brain (SK-N-SH) 21519677
chr11 122584593 122585137 ZBTB33 GTRD no Brain (SK-N-SH) 108004393
chr11 122584602 122585118 ZBTB33 GTRD no Brain (SK-N-SH) 21519678
chr11 122584602 122585118 ZBTB33 GTRD no Brain (SK-N-SH) 108004394
chr11 122584604 122585143 ZBTB33 GTRD no Brain (SK-N-SH) 21519679
chr11 122584604 122585143 ZBTB33 GTRD no Brain (SK-N-SH) 108004395
chr11 122584684 122585147 RELA UCSC Txn Factor no Conserved 108004398
chr11 122584689 122585088 ZBTB33 GTRD no Brain (SK-N-SH) 21519682
chr11 122584689 122585088 ZBTB33 GTRD no Brain (SK-N-SH) 108004399
chr11 122584692 122585160 ZBTB33 GTRD no Brain (SK-N-SH) 21519683
chr11 122584692 122585160 ZBTB33 GTRD no Brain (SK-N-SH) 108004400
chr11 122584722 122585107 ZBTB33 GTRD no Brain (SK-N-SH) 21519684
chr11 122584722 122585107 ZBTB33 GTRD no Brain (SK-N-SH) 108004401
chr11 122584763 122585147 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004402
chr11 122585065 122585360 SOX2 GTRD no Neural Stem Cells (H9) 21519685
chr11 122585065 122585360 SOX2 GTRD no Neural Stem Cells (H9) 108004403
chr11 122585085 122585100 NFYB JASPAR yes 42023284
chr11 122585085 122585100 NFYB JASPAR yes 114146100
Genes associated with rs2187519[chr11:122585086], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More