EnhancerDB
  1. Home
  2. SNP
  3. rs2200959[chr6:47095410]
Enhancers that have rs2200959[chr6:47095410]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2200959[chr6:47095410]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47095394 47095415 ZNF263 JASPAR yes 102000736
chr6 47095396 47095416 RREB1 JASPAR yes 102000737
chr6 47095397 47095417 RREB1 JASPAR yes 102000738
chr6 47095397 47095418 ZNF263 JASPAR yes 102000739
chr6 47095401 47095415 GLIS2 JASPAR yes 102000743
chr6 47095401 47095415 GLIS3 JASPAR yes 102000744
chr6 47095405 47095411 SP1 TRANSFAC yes 102000745
Genes associated with rs2200959[chr6:47095410], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 46761127 46807515 + MEP1A ENSG00000112818.5 46761127 287895 Breast 0.229892 6652