EnhancerDB
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  3. rs2213733[chr1:172329380]
Enhancers that have rs2213733[chr1:172329380]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2213733[chr1:172329380]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172329370 172329384 ONECUT1 JASPAR yes 33126039
chr1 172329373 172329383 PAX3 JASPAR yes 33126040
chr1 172329373 172329383 PAX7 JASPAR yes 33126041
Genes associated with rs2213733[chr1:172329380], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More