EnhancerDB
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  3. rs2236062[chr6:44041782]
Enhancers that have rs2236062[chr6:44041782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2236062[chr6:44041782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44039982 44042697 POLR2A UCSC Txn Factor no Conserved 108540407
chr6 44041035 44041979 YY1 UCSC Txn Factor no Conserved 108540413
chr6 44041770 44041785 HNF4G JASPAR yes 101820880
chr6 44041770 44041785 NR2C2 JASPAR yes 101820881
chr6 44041771 44041785 RXRB JASPAR yes 101820882
chr6 44041771 44041785 RXRG JASPAR yes 101820883
chr6 44041773 44041783 SP1 JASPAR yes 101820884
chr6 44041780 44041784 LFA1 TRANSFAC yes 101820885
Genes associated with rs2236062[chr6:44041782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More