EnhancerDB
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  3. rs2239205[chr12:120666465]
Enhancers that have rs2239205[chr12:120666465]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120660005 120685163 enh2636
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2239205[chr12:120666465]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063015
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063016
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063017
chr12 120666292 120667365 TCF7L2 GTRD no Colon (HCT116) 21578307
chr12 120666292 120667365 TCF7L2 GTRD no Colon (HCT116) 108063018
chr12 120666435 120666785 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21578308
chr12 120666435 120666785 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108063019
chr12 120666460 120666466 PEA3 TRANSFAC yes 124156264
Genes associated with rs2239205[chr12:120666465], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More