EnhancerDB
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  3. rs2249619[chr5:172205000]
Enhancers that have rs2249619[chr5:172205000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2249619[chr5:172205000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172204315 172205790 POLR2A UCSC Txn Factor no Conserved 108537492
chr5 172204991 172205002 FLI1 JASPAR yes 67825305
chr5 172204991 172205004 ELF3 JASPAR yes 67825306
chr5 172204992 172205003 ELF5 JASPAR yes 67825308
chr5 172204992 172205004 EHF JASPAR yes 67825309
chr5 172204992 172205004 ELF1 JASPAR yes 67825310
chr5 172204992 172205004 ELF4 JASPAR yes 67825311
chr5 172204992 172205005 ELF1 JASPAR yes 67825312
chr5 172204993 172205001 FEV JASPAR yes 67825313
Genes associated with rs2249619[chr5:172205000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More