EnhancerDB
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  3. rs2254414[chr17:28061130]
Enhancers that have rs2254414[chr17:28061130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2254414[chr17:28061130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28061115 28061135 RREB1 JASPAR yes 53755395
chr17 28061125 28061136 DUX4 JASPAR yes 53755396
chr17 28061128 28061141 NFKB1 JASPAR yes 53755397
chr17 28061128 28061141 NFKB2 JASPAR yes 53755398
Genes associated with rs2254414[chr17:28061130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More