EnhancerDB
  1. Home
  2. SNP
  3. rs2256539[chr6:29937740]
Enhancers that have rs2256539[chr6:29937740]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs2256539[chr6:29937740]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29937721 29937741 RREB1 JASPAR yes 101019482
chr6 29937721 29937742 ZNF263 JASPAR yes 101019483
Genes associated with rs2256539[chr6:29937740], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 29523406 29601753 - GABBR1 ENSG00000204681.6 29601753 335987 Heart 0.0270936 6320