EnhancerDB
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  3. rs2269854[chr6:30789799]
Enhancers that have rs2269854[chr6:30789799]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2269854[chr6:30789799]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30789682 30790078 CTCF UCSC Txn Factor no Conserved 108539556
chr6 30789796 30789806 NFATC3 JASPAR yes 101055056
chr6 30789798 30789804 ETS1 JASPAR yes 101055057
Genes associated with rs2269854[chr6:30789799], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More