EnhancerDB
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  3. rs2275470[chr1:181065807]
Enhancers that have rs2275470[chr1:181065807]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2275470[chr1:181065807]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181065523 181065859 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21354316
chr1 181065523 181065859 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107848286
chr1 181065556 181065852 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21354317
chr1 181065556 181065852 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107848287
chr1 181065797 181065814 NR3C1 JASPAR yes 33552027
chr1 181065797 181065814 NR3C2 JASPAR yes 33552028
chr1 181065797 181065814 NR3C1 JASPAR yes 118407795
chr1 181065797 181065814 NR3C2 JASPAR yes 118407796
chr1 181065799 181065814 AR JASPAR yes 33552029
Genes associated with rs2275470[chr1:181065807], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More