EnhancerDB
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  3. rs228749[chr17:42174570]
Enhancers that have rs228749[chr17:42174570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs228749[chr17:42174570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42174266 42174846 ZNF274 GTRD no Blood (GM12878) 21761869
chr17 42174266 42174846 ZNF274 GTRD no Blood (GM12878) 108261975
chr17 42174270 42174851 ZNF274 GTRD no Blood (GM12878) 21761870
chr17 42174270 42174851 ZNF274 GTRD no Blood (GM12878) 108261976
chr17 42174275 42174693 ZNF274 GTRD no Bone Marrow (K562) 21761871
chr17 42174275 42174693 ZNF274 GTRD no Bone Marrow (K562) 108261977
chr17 42174283 42174955 TCF7L2 GTRD no Colon (HCT116) 21761872
chr17 42174283 42174955 TCF7L2 GTRD no Colon (HCT116) 108261978
chr17 42174314 42174869 TCF7L2 GTRD no Colon (HCT116) 21761873
chr17 42174314 42174869 TCF7L2 GTRD no Colon (HCT116) 108261979
chr17 42174318 42174848 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761874
chr17 42174318 42174848 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261980
chr17 42174321 42174689 ZNF274 GTRD no Blood (GM12878) 21761875
chr17 42174321 42174689 ZNF274 GTRD no Blood (GM12878) 108261981
chr17 42174347 42174863 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761876
chr17 42174347 42174863 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261982
chr17 42174353 42174747 ZNF274 GTRD no Blood (GM12878) 21761877
chr17 42174353 42174747 ZNF274 GTRD no Blood (GM12878) 108261983
chr17 42174441 42174748 ZNF274 GTRD no Blood (GM12878) 21761878
chr17 42174441 42174748 ZNF274 GTRD no Blood (GM12878) 108261984
chr17 42174502 42174866 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761879
chr17 42174502 42174866 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261985
chr17 42174517 42174667 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761880
chr17 42174517 42174667 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261986
chr17 42174528 42174758 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761881
chr17 42174528 42174758 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261987
chr17 42174543 42174913 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21761882
chr17 42174543 42174913 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108261988
chr17 42174563 42174574 GCM1 JASPAR yes 54386632
chr17 42174564 42174574 GCM2 JASPAR yes 54386633
chr17 42174565 42174875 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21761883
chr17 42174565 42174875 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261989
Genes associated with rs228749[chr17:42174570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More