EnhancerDB
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  3. rs228766[chr17:42186813]
Enhancers that have rs228766[chr17:42186813]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs228766[chr17:42186813]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42186797 42186813 RFX2 JASPAR yes 54388361
chr17 42186797 42186813 RFX3 JASPAR yes 54388362
chr17 42186797 42186813 RFX4 JASPAR yes 54388363
chr17 42186797 42186813 RFX5 JASPAR yes 54388364
chr17 42186798 42186817 RFX2 JASPAR yes 54388365
chr17 42186802 42186813 ESRRB JASPAR yes 54388366
chr17 42186810 42186820 ZNF740 JASPAR yes 54388367
chr17 42186811 42186821 GCM2 JASPAR yes 54388368
chr17 42186811 42186823 INSM1 JASPAR yes 54388369
chr17 42186812 42186832 RREB1 JASPAR yes 54388370
Genes associated with rs228766[chr17:42186813], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More