EnhancerDB
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  3. rs228768[chr17:42191893]
Enhancers that have rs228768[chr17:42191893]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs228768[chr17:42191893]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42191880 42191893 ZBTB18 JASPAR yes 54389060
chr17 42191881 42191901 TP63 JASPAR yes 54389061
chr17 42191882 42191900 TP73 JASPAR yes 54389068
chr17 42191884 42191903 RFX2 JASPAR yes 54389069
chr17 42191886 42191901 RFX5 JASPAR yes 54389070
Genes associated with rs228768[chr17:42191893], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 41561233 41621831 + DHX8 ENSG00000067596.6 41561233 570062 Spleen 0.281569 15897