EnhancerDB
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  3. rs2288391[chr5:77806332]
Enhancers that have rs2288391[chr5:77806332]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2288391[chr5:77806332]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77806326 77806341 TFAP2A JASPAR yes 63594519
chr5 77806329 77806340 TFAP2A JASPAR yes 63594520
chr5 77806330 77806339 TFAP2A JASPAR yes 63594521
Genes associated with rs2288391[chr5:77806332], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More