EnhancerDB
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  3. rs2290096[chr5:173208886]
Enhancers that have rs2290096[chr5:173208886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2290096[chr5:173208886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173208875 173209721 TCF7L2 UCSC Txn Factor no Conserved 108537608
chr5 173208881 173208886 GATA1 TRANSFAC yes 67904379
chr5 173208881 173208887 GATA3 JASPAR yes 67904380
chr5 173208881 173208891 GATA1 TRANSFAC yes 67904381
Genes associated with rs2290096[chr5:173208886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More