EnhancerDB
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Enhancers that have rs233958[chr16:4340305]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs233958[chr16:4340305]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4335970 4340905 TCF7L2 GTRD no Colon (HCT116) 21686304
chr16 4339547 4340798 ZNF143 GTRD no Epithelial (MCF-7) 21686374
chr16 4339548 4340449 ZNF143 GTRD no Epithelial (MCF-7) 21686375
chr16 4339573 4340621 ZNF143 GTRD no Epithelial (MCF-7) 21686379
chr16 4339674 4340351 TCF7L2 GTRD no Colon (HCT116) 21686380
chr16 4339784 4340463 ZNF143 GTRD no Epithelial (MCF-7) 21686381
chr16 4339931 4340829 TCF7L2 GTRD no Colon (HCT116) 21686383
chr16 4339982 4341093 ZNF143 GTRD no Epithelial (MCF-7) 21686384
chr16 4340064 4340744 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686385
chr16 4340128 4340632 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686386
chr16 4340152 4340662 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686387
chr16 4340160 4340730 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21686388
chr16 4340162 4340626 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21686389
chr16 4340166 4340562 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686390
chr16 4340168 4340638 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21686391
chr16 4340169 4340825 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21686392
chr16 4340180 4340636 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686393
chr16 4340189 4340565 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21686394
chr16 4340196 4340846 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686395
chr16 4340215 4341102 TCF7L2 GTRD no Colon (HCT116) 21686396
chr16 4340218 4340528 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21686397
chr16 4340230 4340600 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686398
chr16 4340233 4340569 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686399
chr16 4340244 4340588 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686400
chr16 4340245 4340585 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686401
chr16 4340246 4340967 TCF7L2 GTRD no Colon (HCT116) 21686402
chr16 4340251 4340581 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686403
chr16 4340252 4340528 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686404
chr16 4340259 4340589 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686405
chr16 4340263 4340553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686406
chr16 4340266 4340650 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686407
chr16 4340268 4340558 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686408
chr16 4340272 4340572 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686409
chr16 4340279 4340535 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686410
chr16 4340284 4340514 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686411
chr16 4340285 4340897 TCF7L2 GTRD no Colon (HCT116) 21686412
chr16 4340287 4340308 IRF1 JASPAR yes 9267171
chr16 4340288 4340309 IRF1 JASPAR yes 9267173
chr16 4340293 4340528 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686413
chr16 4340299 4340523 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686414
chr16 4340301 4340313 NHLH1 JASPAR yes 9267175
chr16 4340302 4340312 TFAP4 JASPAR yes 9267176
Genes associated with rs233958[chr16:4340305], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More