EnhancerDB
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  3. rs2360646[chr12:52518271]
Enhancers that have rs2360646[chr12:52518271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs2360646[chr12:52518271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52518260 52518281 IRF1 JASPAR yes 120919337
chr12 52518264 52518276 YY1 JASPAR yes 120919338
chr12 52518269 52518273 YY1 TRANSFAC yes 120919339
Genes associated with rs2360646[chr12:52518271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More