EnhancerDB
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  3. rs2362838[chr5:77815004]
Enhancers that have rs2362838[chr5:77815004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2362838[chr5:77815004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77814956 77815219 RUNX3 UCSC Txn Factor no Conserved 108535454
chr5 77814959 77815202 EBF1 UCSC Txn Factor no Conserved 108535455
chr5 77815001 77815016 TFAP2A JASPAR yes 63595717
chr5 77815003 77815018 TFAP2C JASPAR yes 63595718
chr5 77815004 77815015 TFAP2A JASPAR yes 63595719
chr5 77815004 77815015 TFAP2B JASPAR yes 63595720
chr5 77815004 77815016 INSM1 JASPAR yes 63595721
Genes associated with rs2362838[chr5:77815004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More