EnhancerDB
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  3. rs2421811[chr1:171406031]
Enhancers that have rs2421811[chr1:171406031]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs2421811[chr1:171406031]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171406018 171406032 POU1F1 JASPAR yes 33080852
chr1 171406029 171406033 YY1 TRANSFAC yes 33080853
chr1 171406030 171406042 POU2F1 JASPAR yes 33080854
chr1 171406030 171406043 POU3F3 JASPAR yes 33080855
chr1 171406030 171406044 POU1F1 JASPAR yes 33080856
chr1 171406031 171406043 POU3F1 JASPAR yes 33080857
chr1 171406031 171406043 POU3F2 JASPAR yes 33080858
chr1 171406031 171406044 POU2F2 JASPAR yes 33080859
Genes associated with rs2421811[chr1:171406031], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More