EnhancerDB
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  3. rs2474295[chr1:27759645]
Enhancers that have rs2474295[chr1:27759645]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2474295[chr1:27759645]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27759632 27759647 FOXA1 JASPAR yes 27693037
chr1 27759634 27759646 FOXC2 JASPAR yes 27693038
chr1 27759635 27759646 FOXB1 JASPAR yes 27693039
chr1 27759635 27759646 FOXC1 JASPAR yes 27693040
chr1 27759636 27759647 FOXA1 JASPAR yes 27693042
Genes associated with rs2474295[chr1:27759645], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More