EnhancerDB
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  3. rs2474300[chr1:27770660]
Enhancers that have rs2474300[chr1:27770660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2474300[chr1:27770660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27770649 27770660 TBX20 JASPAR yes 27694871
chr1 27770649 27770660 TBX2 JASPAR yes 27694872
chr1 27770649 27770662 EOMES JASPAR yes 27694873
chr1 27770650 27770660 TBR1 JASPAR yes 27694875
chr1 27770655 27770669 JUN JASPAR yes 27694876
chr1 27770658 27770669 FOSL2 JASPAR yes 27694877
chr1 27770658 27770669 JUNB JASPAR yes 27694878
chr1 27770659 27770670 FOS JASPAR yes 27694879
chr1 27770659 27770670 FOSL1 JASPAR yes 27694880
chr1 27770659 27770670 JUND JASPAR yes 27694881
chr1 27770659 27770670 NFE2 JASPAR yes 27694882
chr1 27770660 27770667 JUN TRANSFAC yes 27694883
chr1 27770660 27770669 JDP2 JASPAR yes 27694884
chr1 27770660 27770671 FOSL2 JASPAR yes 27694885
chr1 27770660 27770671 JUNB JASPAR yes 27694886
Genes associated with rs2474300[chr1:27770660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More